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rs727479 — CYP19A1
Chromosome 15 Risk Allele C Category Reproductive Hormones Aromatase, Estrogen Metabolism, Bone Health, Breast Cancer, Menopause, Estrogen

Intronic eQTL variant in the aromatase gene CYP19A1; the minor C allele is the strongest common genetic determinant of lower circulating estradiol in postmenopausal women, acting through altered aromatase expression in peripheral tissues.

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rs7305099 — WNK1 WNK1 intronic variant
Chromosome 12 Risk Allele G Category Blood Pressure & Hypertension Blood Pressure, Hypertension, Kidney Function, Cardiovascular, Salt Sensitivity, Renal Function

Intronic WNK1 variant where the G allele is associated with increased essential hypertension risk while the minor T allele is protective; WNK1 is the master kinase controlling renal sodium-chloride reabsorption through the NCC cotransporter

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rs73885316 — APOL1 p.N264K
Chromosome 22 Risk Allele A Category Uric Acid & Kidney Function Kidney Disease, Kidney Function, Nephrology, Ancestry-Specific, Renal Function, Cardiovascular

Protective missense modifier in APOL1 that abolishes G2 risk allele cytotoxicity, strongly reducing kidney disease risk in carriers of G2-containing high-risk genotypes

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rs763625913 — LDLR Q770* (c.2308C>T)
Chromosome 19 Risk Allele T Category Atherogenic Lipoproteins Cardiovascular, Cholesterol, LDL Cholesterol, Statins, Genetic Counseling, Heart Disease

Rare pathogenic nonsense variant in the LDL receptor gene that abolishes receptor function, causing receptor-negative familial hypercholesterolemia with severely elevated LDL-C and high premature coronary artery disease risk

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rs9277535 — HLA-DPB1
Chromosome 6 Risk Allele G Category Interferon Signaling & Systemic Autoimmune HLA, MHC Antigen Presentation, Immune & Antiviral, Immune & Autoimmune, Infection Risk, Autoimmune

3' UTR eQTL that reduces HLA-DPB1 expression, impairing antigen presentation and increasing risk for chronic hepatitis B infection; also linked to multiple sclerosis and modulates rheumatoid arthritis risk through a dose-dependent trade-off in immune activation

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rs1420101 — IL1RL1
Chromosome 2 Risk Allele T Category Allergy & Atopic Disease Asthma, Inflammation, Autoimmune, Biologic Therapy, Innate Immunity, Skin

Intronic regulatory variant in IL1RL1 that lowers soluble ST2 (sST2) decoy receptor levels, amplifying IL-33 signaling and increasing susceptibility to asthma, hay fever, and atopic disease

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rs1571583 — GLIS3 GLIS3 Beta Cell Development Variant
Chromosome 9 Risk Allele A Category Blood Sugar & Diabetes Thyroid, Hormones & Thyroid, Energy Metabolism, Diabetes, Metabolic Health

Intronic GLIS3 variant in which the rare A allele modestly elevates TSH, reflecting reduced thyroid transcriptional activity; the same gene drives pancreatic beta cell development, linking thyroid-axis regulation to metabolic energy balance

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rs1695 — GSTP1 Ile105Val
Chromosome 11 Risk Allele G Category Methylation & Detox Detoxification, Glutathione, Phase II, Oxidative Stress, Antioxidants, NRF2 Target

Phase II detoxification enzyme that conjugates glutathione to carcinogens, drugs, and oxidative stress products; this variant alters the active site geometry, changing substrate specificity

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rs17070145 — WWC1 Intronic C>T
Chromosome 5 Risk Allele C Category Neurology & Cognition Cognition, Memory, Alzheimer's, Neuroplasticity, Brain Health

Influences episodic memory performance and hippocampal function through the KIBRA protein's role in synaptic plasticity

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rs1934963 — CYP2C9
Chromosome 10 Risk Allele C Category Pharmacogenomics Drug Metabolism, Pharmacogenomics, Diabetes, Pain Medication, Warfarin

Deep intronic CYP2C9 variant associated with altered drug response to sulfonylurea antidiabetics and other CYP2C9 substrates

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