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rs121909567 — SERPINC1 Budapest 3 (Leu131Phe)
Chromosome 1 Risk Allele A Category Von Willebrand & Anticoagulant Proteins Blood Clotting, Thrombophilia, Blood Thinners, Cardiovascular, Women's Health, Carrier Status

Pathogenic missense in antithrombin III; the A allele causes type II heparin-binding-site (HBS) antithrombin deficiency with heterozygotes carrying 3-5x VTE risk and homozygotes facing severe, often childhood-onset thrombophilia

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rs121965064 — F11 Phe301Leu (Type III)
Chromosome 4 Risk Allele C Category Coagulation & Clotting Factors Blood Clotting, Cardiovascular, Thrombophilia, Carrier Status, Genetic Counseling, Ancestry-Specific

Ashkenazi Jewish founder missense mutation in coagulation factor XI causing impaired FXI dimerization; homozygotes develop hemophilia C (severe FXI deficiency) with post-surgical and trauma-related bleeding, while heterozygotes have partial deficiency with variable bleeding risk; the most prevalent FXI deficiency allele in Ashkenazi Jewish populations

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rs12203592 — IRF4 T allele
Chromosome 6 Risk Allele T Category Skin & Eyes Skin, Hair & Pigmentation, Sun Sensitivity, Melanoma, Cancer Risk, Freckling

Regulatory variant in IRF4 enhancer affecting melanocyte pigmentation, sun sensitivity, freckling, and melanoma susceptibility

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rs12593008 — LIPC
Chromosome 15 Risk Allele C Category Triglycerides & Fatty Acids HDL Cholesterol, Fat Metabolism, Cholesterol, Cardiovascular, Diet

Intronic LIPC variant in intron 1 associated with low HDL risk, predominantly in women; the C allele is the risk allele for reduced HDL-cholesterol levels

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rs12651246 — HELQ HELQ Helicase Meiotic Repair Variant
Chromosome 4 Risk Allele G Category Gamete Quality & DNA Repair Ovarian Reserve, Fertility, Menopause, DNA Repair, Double-Strand Break Repair, Reproductive Health

An intronic variant in HELQ (helicase, POLQ-like) on chromosome 4q21.23; the A allele is associated with delayed age at natural menopause (+0.238 years/allele, p=6×10⁻¹⁷²), reflecting HELQ's role in maintaining the oocyte DNA-repair capacity that preserves ovarian reserve across the reproductive lifespan

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rs12785878 — DHCR7 Near gene T>G
Chromosome 11 Risk Allele G Category Vitamin D Metabolism Vitamin D, Bone Health, Immune System, Cholesterol, Cardiovascular

Influences vitamin D synthesis by regulating how much 7-dehydrocholesterol is available for conversion to vitamin D3 in the skin

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rs137852912 — PCSK9 D374Y
Chromosome 1 Risk Allele T Category Atherogenic Lipoproteins Cardiovascular, Cholesterol, LDL Cholesterol, Heart Disease, Atherosclerosis, Statins

The most severe gain-of-function PCSK9 mutation, increasing LDLR-binding affinity 10-25-fold to cause extreme LDL elevation and early-onset coronary artery disease in carriers of this rare pathogenic variant

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rs17175830 — ZFPM1 ZFPM1 intronic variant
Chromosome 16 Risk Allele A Category Arrhythmia & Heart Rhythm Cardiovascular, Thrombosis, Blood Clotting, Heart Disease, Inflammation, Thrombophilia

Intronic variant in ZFPM1 (FOG1), the master transcriptional co-regulator of megakaryopoiesis; the A allele is the strongest common GWAS signal for elevated platelet count (p=1×10⁻⁵⁰) and plateletcrit, with implications for thrombotic tendency and cardiovascular risk

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rs17878486 — AMELX
Chromosome X Risk Allele T Category Dental & Oral Health Dental & Oral Health, Enamel Health, Bone Health, Minerals, Calcium

Intronic variant in amelogenin X-linked gene affecting enamel mineralization and susceptibility to dental caries and developmental enamel defects

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rs1799782 — XRCC1 R194W
Chromosome 19 Risk Allele A Category Cancer Risk Cancer Risk, DNA Repair, Base Excision Repair, Smoking Interaction, Ancestry

Missense variant in the linker region of XRCC1 that disrupts interaction with the OGG1 glycosylase, impairing base excision repair of oxidative DNA damage; effect direction varies by cancer type and ancestry

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